SNP Profiles matching NA 26

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	AC	GG	CT	GG	AA	CG	AG	CT	GG	GG	AT	CC
1._NA_26	_	_	AC	GG	CT	_	AA	CG	AG	CT	_	_	AT	_
2._NA_26	_	_	AC	GG	CT	_	AA	CG	AG	CT	_	_	AT	_
3._NA_26	_	_	AC	GG	CT	_	AA	CG	AG	CT	_	_	AT	_
4._NA_26	_	_	AC	GG	CT	_	AA	CG	AG	CT	_	_	AT	_
5._NA_26	_	_	AC	GG	CT	_	AA	CG	AG	CT	_	_	AT	_
6._RUQ_1230	_	_	AC	GG	CT	_	AA	CG	AG	CT	_	_	AT	_
7._GC-04-021-2-03	TT	CC	AC	GG	CT	GG	AA	CG	AG	CT	GG	GG	AT	CC
8._GC-04-021-2-03	TT	CC	AC	GG	CT	GG	AA	CG	AG	CT	GG	GG	AT	CC
9._GC-04-021-2-03	TT	CC	AC	GG	CT	GG	AA	CG	AG	CT	GG	GG	AT	CC
10._GC-04-021-2-03	TT	CC	AC	GG	CT	GG	AA	CG	AG	CT	GG	GG	AT	CC
11._GC-04-021-2-03	TT	CC	AC	GG	CT	GG	AA	CG	AG	CT	GG	GG	AT	CC
12._NA_33	_	_	AC	GG	CT	_	AA	CG	AG	TT	_	_	AT	_
13._GC-01-111-6-08	TT	CC	AC	GG	CT	GG	AA	CG	AG	CT	GG	GG	AA	CC
14._RUQ_691	TT	CC	AC	GG	CT	GG	AC	CG	AA	CT	GG	GG	AA	CC
15._GC-01-111-6-08	TT	CC	AC	GG	_	GG	AA	CG	AG	CT	GG	GG	AA	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	CT	GG	GG	AC	CC	CC	TT	GG	GG	TT	CC	CC
1._NA_26	AA	CC	CT	GG	GG	AC	_	CC	_	GG	_	_	_	CC
2._NA_26	AA	CC	CT	GG	GG	AC	_	CC	_	GG	_	_	_	CC
3._NA_26	AA	CC	CT	GG	GG	AC	_	CC	_	GG	_	_	_	CC
4._NA_26	AA	CC	CT	GG	GG	AC	_	CC	_	GG	_	_	_	CC
5._NA_26	AA	CC	CT	GG	GG	AC	_	CC	_	GG	_	_	_	CC
6._RUQ_1230	AA	CC	CT	GG	GG	AC	_	CC	_	GG	_	_	_	CC
7._GC-04-021-2-03	AA	CC	CT	GG	GG	AC	CC	CC	CC	GG	GG	TT	CC	CC
8._GC-04-021-2-03	AA	CC	CT	GG	GG	AC	CC	CC	CC	GG	GG	TT	CC	CC
9._GC-04-021-2-03	AA	CC	CT	GG	GG	AC	CC	CC	CC	GG	GG	TT	CC	CC
10._GC-04-021-2-03	AA	CC	CT	GG	GG	AC	CC	CC	CC	GG	GG	TT	CC	CC
11._GC-04-021-2-03	AA	CC	CT	GG	GG	AC	CC	CC	CC	GG	GG	TT	CC	CC
12._NA_33	AA	CC	CT	GG	GG	AA	_	CT	_	GG	_	_	_	CC
13._GC-01-111-6-08	AA	CC	TT	GT	GG	AA	CC	CC	CC	GG	GG	TT	CC	CG
14._RUQ_691	AA	CC	TT	GG	GG	AA	CC	CC	TT	GG	GG	TT	CC	CG
15._GC-01-111-6-08	AA	CC	TT	GT	GG	AA	CC	CC	CC	GG	GG	TT	CC	CG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	CC	AG	CC	CT	GG	GG	TT	TT	TT	CC	TT	CG	AA
1._NA_26	_	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AA
2._NA_26	_	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AA
3._NA_26	_	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AA
4._NA_26	_	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AA
5._NA_26	_	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AA
6._RUQ_1230	_	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AG
7._GC-04-021-2-03	CC	CC	AG	CC	CT	GG	GG	TT	TT	TT	CC	TT	CG	AA
8._GC-04-021-2-03	CC	CC	AG	CC	CT	GG	GG	TT	TT	TT	CC	TT	CG	AA
9._GC-04-021-2-03	CC	CC	AG	CC	CT	GG	GG	TT	TT	TT	CC	TT	CG	AA
10._GC-04-021-2-03	CC	CC	AG	CC	CT	GG	GG	TT	TT	TT	CC	TT	CG	AA
11._GC-04-021-2-03	CC	CC	AG	CC	CT	GG	GG	TT	TT	TT	CC	TT	CG	AA
12._NA_33	_	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AG
13._GC-01-111-6-08	CC	CC	AG	CC	CC	GG	GG	TT	TT	TT	CC	TT	CG	AA
14._RUQ_691	CC	CC	AG	CC	CC	GG	GG	TT	GT	TT	CC	TT	CG	AA
15._GC-01-111-6-08	CC	CC	AG	CC	CC	GG	GG	TT	TT	TT	CC	TT	CG	AA

Input profile: NA_26 RUQ_1230

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._NA_26

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 4203 8 > FP

Dapeng Zhang, 2016

2._NA_26

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 4203 7 > FP

Dapeng Zhang, 2016

3._NA_26

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 4203 6 > FP

Dapeng Zhang, 2016

4._NA_26

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 4203 4 > FP

Dapeng Zhang, 2016

5._NA_26

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 4203 2

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

6._NA_26 RUQ_1230

97.9 %
24 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

7._NA_26 GC-04-021-2-03

97.6 %
42 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

8._NA_26 GC-04-021-2-03

97.6 %
42 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP4

9._NA_26 GC-04-021-2-03

97.6 %
42 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6 > FP1

10._NA_26 GC-04-021-2-03

97.6 %
42 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7 > FP2

11._NA_26 GC-04-021-2-03

97.6 %
42 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8 > FP3

12._NA_33

91.7 %
24 shared markers

View View all Clone Any

Cocoa Research Institute of Ghana (CRIG), Ghana

Location: M6 18, 19

Dapeng Zhang, 2016

13._NA_45 GC-01-111-6-08

90.5 %
42 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

14._SPA_16_[COL] RUQ_691

90.5 %
42 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

15._NA_45 GC-01-111-6-08

90.2 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 14

Notes: 14 > FP3

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP998	32	TcSNP999	33	TcSNP1060	34	TcSNP1063	35	TcSNP1111
36	TcSNP1126	37	TcSNP1253	38	TcSNP1309	39	TcSNP1439	40	TcSNP1442
41	TcSNP1458	42	TcSNP1484